createJacobianDeterminantImage

Compute the jacobian determinant from a transformation file

createJacobianDeterminantImage(domainImg, tx, doLog = FALSE, geom = FALSE)

Arguments

domainImg	image that defines transformation domain
tx	deformation transformation file name
doLog	return the log jacobian
geom	use the geometric jacobian calculation (boolean)

Value

jacobianImage

Examples

fi<-antsImageRead( getANTsRData("r16") ,2)
mi<-antsImageRead( getANTsRData("r64") ,2)
fi<-resampleImage(fi,c(128,128),1,0)
mi<-resampleImage(mi,c(128,128),1,0)
mytx<-antsRegistration(fixed=fi , moving=mi, typeofTransform = c("SyN") )
jac<-createJacobianDeterminantImage(fi,mytx$fwdtransforms[[1]],1)
# plot(jac)