Source code for antspynet.architectures.create_denoising_auto_encoder_super_resolution_model


from tensorflow.keras.models import Model
from tensorflow.keras.layers import (Input, Average, Add,
                          Conv2D, Conv2DTranspose,
                          Conv3D, Conv3DTranspose)

[docs]def create_denoising_auto_encoder_super_resolution_model_2d(input_image_size, convolution_kernel_sizes=[(3, 3), (5, 5)], number_of_encoding_layers=2, number_of_filters=64 ): """ 2-D implementation of the denoising autoencoder image super resolution deep learning architecture. Arguments --------- input_image_size : tuple of length 3 Used for specifying the input tensor shape. The shape (or dimension) of that tensor is the image dimensions followed by the number of channels (e.g., red, green, and blue). convolution_kernel_sizes : list of 2-d tuples specifies the kernel size at each convolution layer. Default values are the same as given in the original paper. The length of kernel size list must be 1 greater than the tuple length of the number of filters. number_of_encoding_layers : integer The number of encoding layers. number_of_filters : integer The number of filters for each encoding layer. Returns ------- Keras model A 2-D Keras model defining the network. Example ------- >>> model = create_denoising_auto_encoder_super_resolution_model_2d((128, 128, 1)) >>> model.summary() """ inputs = Input(shape = input_image_size) outputs = inputs encoding_convolution_layers = [] for i in range(number_of_encoding_layers): if i == 0: outputs = Conv2D(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], activation='relu', padding='same')(outputs) else: layer = Conv2D(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], activation='relu', padding='same')(outputs) encoding_convolution_layers.append(layer) outputs = encoding_convolution_layers[-1] for i in range(number_of_encoding_layers): index = len(encoding_convolution_layers) - i - 1 deconvolution = Conv2DTranspose(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], padding='same', activation='relu')(outputs) outputs = Add()([encoding_convolution_layers[index], deconvolution]) number_of_channels = input_image_size[-1] outputs = Conv2D(filters=number_of_channels, kernel_size=convolution_kernel_sizes[1], activation='linear', padding='same')(outputs) sr_model = Model(inputs=inputs, outputs=outputs) return(sr_model)
[docs]def create_denoising_auto_encoder_super_resolution_model_3d(input_image_size, convolution_kernel_sizes=[(3, 3, 3), (5, 5, 5)], number_of_encoding_layers=2, number_of_filters=64 ): """ 2-D implementation of the denoising autoencoder image super resolution deep learning architecture. Arguments --------- input_image_size : tuple of length 3 Used for specifying the input tensor shape. The shape (or dimension) of that tensor is the image dimensions followed by the number of channels (e.g., red, green, and blue). convolution_kernel_sizes : list of 3-d tuples specifies the kernel size at each convolution layer. Default values are the same as given in the original paper. The length of kernel size list must be 1 greater than the tuple length of the number of filters. number_of_encoding_layers : integer The number of encoding layers. number_of_filters : integer The number of filters for each encoding layer. Returns ------- Keras model A 3-D Keras model defining the network. Example ------- >>> model = create_denoising_auto_encoder_super_resolution_model_3d((128, 128, 128, 1)) >>> model.summary() """ inputs = Input(shape = input_image_size) outputs = inputs encoding_convolution_layers = [] for i in range(number_of_encoding_layers): if i == 0: outputs = Conv3D(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], activation='relu', padding='same')(outputs) else: layer = Conv3D(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], activation='relu', padding='same')(outputs) encoding_convolution_layers.append(layer) outputs = encoding_convolution_layers[-1] for i in range(number_of_encoding_layers): index = len(encoding_convolution_layers) - i - 1 deconvolution = Conv3DTranspose(filters=number_of_filters, kernel_size=convolution_kernel_sizes[0], padding='same', activation='relu')(outputs) outputs = Add()([encoding_convolution_layers[index], deconvolution]) number_of_channels = input_image_size[-1] outputs = Conv3D(filters=number_of_channels, kernel_size=convolution_kernel_sizes[1], activation='linear', padding='same')(outputs) sr_model = Model(inputs=inputs, outputs=outputs) return(sr_model)